Skip to main content

ZooArchNet connects zooarchaeological specimens to biodiversity and archaeological data networks

Ancient traces of this footprint can be found in animal bones, shells, scales and antlers at archaeological sites. Together, these specimens tell the millennia-long story of how humans have hunted, domesticated and transported animals, altered landscapes and responded to environmental changes such as shifting temperatures and sea levels.

The human environmental footprint is not only deep, but old. Now, that story is available digitally through a new open-access data platform known as ZooArchNet, which links records of animals across biological and archaeological databases.

Dlium ZooArchNet connects zooarchaeological specimens to biodiversity and archaeological data networks

Making these specimen records accessible digitally helps provide a long-term perspective on current biodiversity crises, such as animal extinction and habitat loss, and could lead to more informed conservation policies, said Michelle LeFebvre, postdoctoral associate at the Florida Museum of Natural History and lead author of a study introducing ZooArchNet.

"If we're interested in really understanding the long history of human-animal interactions and environmental change, these records are key. They fill a gap between paleontological and modern records and reconstruct biodiversity baselines from the earliest periods of human history," she said.

Zooarchaeological specimens, which can range from a carved bone pin to a shell fragment from a heap of discarded oysters, provide both biologically and culturally important information, said LeFebvre.

ZooArchNet connects the biological data for these ancient animal specimens in VertNet and other biodiversity databases with their associated archaeological information in cultural databases such as Open Context.

Robert Guralnick, co-principal investigator of ZooArchNet and Florida Museum associate curator of bioinformatics, said the platform's goal is "not to be 'yet another data portal,' but a connector across disciplines. In that way, ZooArchNet is more of a bridge than anything else, but it does that bridging in a formal way to make data work."

This interdisciplinary connection will enable data-rich biodiversity research essential for understanding humans' widespread impact on the environment, said Kitty Emery, co-principal investigator of ZooArchNet and Florida Museum associate curator of environmental archaeology.

"We often think that our dramatic influence on the natural world is a modern phenomenon, but in reality, humans have shaped the environment for hundreds of thousands of years," Emery said.

"Factoring that history into current studies of biodiversity can provide ancient lessons about how and why people make certain decisions about using their environment. Why do people hunt some animals to extinction and domesticate others? What motivates them to shift from sustainable environmental uses to ones that decimate landscapes? The human component provides that side of the equation—an essential piece of the puzzle when trying to solve modern environmental problems," she said.

As conservation groups prioritize species on the brink, zooarchaeological records can offer insights into where animals lived in the past, how their distribution has shifted, what roles people may have played in their movements and how close relationships between people and domesticated animals have evolved over time. Sometimes these records tell a surprising story, LeFebvre said.

Her work with historical records of hutia, Caribbean rodents that resemble small capybaras, shows that indigenous people transported some of these animals to new islands, expanding their range into areas where they had not lived previously. These records can lead to better-informed conservation of hutia, several species of which are currently vulnerable to extinction or in danger of disappearing from certain islands, LeFebvre said.

Dlium.com ZooArchNet connects zooarchaeological specimens to biodiversity and archaeological data networks

"When you see people saying, 'This critter is native to this island chain,' these records help us say, 'Actually, it was human-introduced and we should think about what that may mean for conservation efforts over time. Zooarchaeological specimens really contribute to what we conceptualize as natural distributions," she said.

Zooarchaeological specimens can also provide insights into how, when and why humans domesticated animals in the distant past. Research by Emery and her colleague Erin Thornton of Washington State University on the earliest uses of the Mexican domesticated turkey, the ancestor of modern domestic turkeys, highlights how motivations for raising animals can change over time.

"Our recent work suggests that these birds were first domesticated for their feathers and symbolic links to power and prestige, rather than as a source of food," she said.

Archaeology can also illuminate how people contended with challenges such as rising sea levels and fluctuating temperatures in the past. Ongoing work by LeFebvre and Neill Wallis, Florida Museum associate curator of archaeology, shows that the diet of people on Florida's Gulf Coast transitioned from freshwater to marine food sources as the climate cooled 1,400 years ago.

"Humans have dealt with climate change in the past, though not at the same scale of devastation we're facing now. Reconstructing their responses provides us with a critical perspective. Where did people go? What changes in animals and plants happened in the past that we can anticipate happening again? We have a long human record that we can look back to and model off of," LeFebvre said.

One of the steps in the creation of ZooArchNet was designing protocols to standardize and publish zooarchaeological data in ways that both biodiversity and archaeological researchers could use, Emery said.

"Zooarchaeologists have been getting data out there, but until now, the data have not been discoverable, searchable and usable in an open-access way by the larger biological research community. ZooArchNet allows zooarchaeological data to be part of the massive interdisciplinary movement toward biodiversity data sharing and accessibility while preserving the human component of how life on Earth has changed," she said.

LeFebvre said that making zooarchaeological data discoverable via ZooArchNet means "the sky's the limit" for new types of interdisciplinary collaborations and research questions.

"If we want to conduct studies that will help inform policy, the data need to be open to all kinds of minds and disciplines. That's the contribution I'm most excited to be a part of. That's bigger than any one discipline or research community—that's huge."

Journal : Michelle J. LeFebvre et al. ZooArchNet: Connecting zooarchaeological specimens to the biodiversity and archaeology data networks, PLOS ONE, April 12, 2019, DOI:10.1371/journal.pone.0215369

Popular Posts

Purhepecha oak (Quercus purhepecha), new species of shrub oak endemic to the state of Michoacán, Mexico

NEWS - In Mexico, several Quercus shrubby species are taxonomically very problematic including 8 taxa with similar characteristics. Now researchers report the purhepecha oak ( Quercus purhepecha De Luna-Bonilla, S. Valencia & Coombes sp. nov.) as a new tomentose shrubby white oak species with a distribution only in the Cuitzeo basin in the Trans-Mexican Volcanic Belt (TMVB). Quercus Linnaeus (1753) subdivided into 2 subgenera and 8 sections of which section Quercus (white oaks) has the widest distribution in the Americas, Asia and Europe. This section is very diverse in Mexico and Central America with phylogenomic evidence indicating recent and accelerated speciation in these regions. The number of shrubby oak species in Mexico is still uncertain. De Luna-Bonilla of the Universidad Nacional Autónoma de México and colleagues found at least 3 taxa in the TMVB, specifically Quercus frutex Trelease (1924), Quercus microphylla Née (1801) and Quercus repanda Bonpland (1809). In 2016,...

Javan mocca or Javan slender caesar (Amanita javanica)

OPINION - Javan mocca or Javan slender caesar ( Amanita javanica ) is a mysterious fungus species and has been enigmatic since it was first reported by Boedijn in 1951 and after that no explanation or reporting of specimens is believed to be the same as expected. Boedijn (1951) described A. javanica which grew on Java island as having the characteristics covered in the Amanita genus. Corner and Bas in 1962 tried to describe Javan mocca and all species in Amanita based on specimens in Singapore. Over time some reports say that they have found A. javanica specimens in other Southeast Asia including also China, Japan, India and Nepal. But there is no definitive knowledge and many doubt whether the specimen is the same as described by Boedijn (1951). I was fortunate to have seen this species one afternoon and soon I took out a camera for some shots. In fact, I've only met this mushroom species once. Javan mocca is an endangered species and I have never seen in my experience in...

Tekijem (Cyperus cyperoides)

Tekijem ( Cyperus cyperoides ) is a plant species in Cyperaceae, annual grasses that grow in seasonal wetlands, open or shaded fields, swamps, ponds, rice fields, roadsides, open forests, secondary forests and shrubs at altitudes up to 1,800 m in the tropics. C. cyperoides has an upright, triangular shape, 20-75 cm tall from a very short rhizome and has no stolon. The lanceolate-shaped leaves are narrow and long, the tips are pointed, slippery, shiny, green and grow at the bottom and at the top of the stem. The terminal flower appears on the tip of the stem, cylindrical spiklet shaped and green. Each stem has two to seven flowers, each of which has a short or long stem that grows at the end of the stem together with the leaves. Tekijem grows solitary or in small groups at a distance. Propagating using vegetative and generative methods using seeds. At least three sub-species are Cyperus cyperoides cyperoides , Cyperus cyperoides flavus and Cyperus cyperoides pseudoflavus . Th...